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GPIT1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"GPIT1" - Glycosyl phosphatidyl inositol transamidase subunit in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPIT1Glycosyl phosphatidyl inositol transamidase subunit (774 aa)    
Predicted Functional Partners:
EDP00213
Predicted protein (338 aa)
     
  0.997
LRG5
Predicted protein (681 aa)
     
  0.985
EDP06780
Predicted protein (882 aa)
     
  0.945
VPE1
Vacuolar processing enzyme (661 aa)
     
  0.939
EDP02316
Predicted protein (638 aa)
     
        0.653
EDP05306
Predicted protein (398 aa)
     
        0.510
MRP7
ABC transporter, multidrug resistance associated protein (378 aa)
     
        0.508
GTR14
Glycosyl transferase (378 aa)
     
 
  0.502
TGD1
Lipid transfer machine permease (245 aa)
     
        0.500
GTR1
Glycosyl transferase (254 aa)
     
 
  0.497
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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