STRINGSTRING
EDP05663 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05663" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05663Predicted protein (237 aa)    
Predicted Functional Partners:
EDP08962
Predicted protein (369 aa)
     
        0.694
EDP08048
Predicted protein (385 aa)
     
        0.673
MOT51
Predicted protein (4051 aa)
     
        0.669
EDP05664
Lipoxygenase (2315 aa)
     
        0.651
EDP00734
Predicted protein (126 aa)
     
        0.587
SMC4
Structural maintenance of chromosomes protein 4 (1237 aa)
     
        0.511
EDP09853
Predicted protein (1679 aa)
     
        0.509
EDP05605
Predicted protein (5374 aa)
     
        0.505
EDP01241
Predicted protein (367 aa)
     
        0.500
MOT3
Predicted protein (1739 aa)
     
        0.478
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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