STRINGSTRING
EDP05664 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05664" - Lipoxygenase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05664Lipoxygenase (2315 aa)    
Predicted Functional Partners:
POC18
Centriole proteome protein (2287 aa)
     
   
  0.695
MOT51
Predicted protein (4051 aa)
     
   
0.694
EDP09486
Predicted protein (1155 aa)
     
        0.684
EDP05605
Predicted protein (5374 aa)
     
        0.665
MOT3
Predicted protein (1739 aa)
     
        0.654
EDP05663
Predicted protein (237 aa)
     
        0.651
EDP02731
Predicted protein (467 aa)
     
        0.648
EDO97128
Predicted protein (448 aa)
     
        0.647
NPH4
Nephrocystin-4-like protein (1772 aa)
     
        0.633
POC3
Centriole proteome protein (2473 aa)
     
        0.622
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (9%) [HD]