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PSL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PSL1" - Signal peptide peptidase, eukaryotic-type in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSL1Signal peptide peptidase, eukaryotic-type (383 aa)    
Predicted Functional Partners:
SEC61A
SEC61-alpha subunit of ER-translocon (476 aa)
     
        0.781
EDO97810
Translocon-associated protein alpha subunit (244 aa)
     
      0.749
GTR4
Dolichol-phosphate glucosyltransferase (373 aa)
     
        0.718
EDP02401
Predicted protein (443 aa)
     
        0.704
SEC23A
COP-II coat subunit (762 aa)
     
        0.702
EDP00619
Predicted protein (717 aa)
     
        0.699
EDP09336
UDP galactose transporter (338 aa)
     
   
  0.698
EDP01766
Predicted protein (368 aa)
     
        0.686
SEC61G
SEC61-gamma subunit or ER translocon (68 aa)
     
        0.684
SEC61B
SEC61-beta subunit of ER-translocon (89 aa)
     
        0.684
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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