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EDP05717 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05717" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05717Predicted protein (894 aa)    
Predicted Functional Partners:
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
 
  0.836
EDP04144
Predicted protein (1362 aa)
     
        0.523
EDO97302
Histone methyltransferase (2487 aa)
     
        0.523
EDP08005
Predicted protein (3780 aa)
     
        0.514
EDP02246
Predicted protein (1150 aa)
     
        0.514
POL1A
PolI-like DNA polymerase (498 aa)
     
        0.505
RWP13
RWP-RK transcription factor (1428 aa)
     
        0.504
TRF4
Trf4 poly(A) polymerase (1144 aa)
     
        0.499
EDP00601
FAB-like protein, FYVE-domain PI-3,4-kinase (1269 aa)
     
        0.497
EDP03833
Predicted protein (612 aa)
     
        0.496
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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