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EDP05722 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05722" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05722Predicted protein (305 aa)    
Predicted Functional Partners:
CDKH1
Cyclin dependent kinase (439 aa)
     
        0.599
MUT6
DEAH-box RNA helicase (1278 aa)
     
        0.545
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
        0.519
UBC4
E2 ubiquitin-conjugating-like enzyme (159 aa)
     
        0.479
EDP03378
Predicted protein (2505 aa)
     
        0.476
TF2H2
Transcription factor TFIIH, 44 kDa subunit (413 aa)
     
        0.475
FAP295
Cyclic nucleotide dependent protein kinase (718 aa)
     
        0.448
SPL5
pre-mRNA-splicing factor (488 aa)
     
        0.437
CWC22
Cwc22 pre-mRNA splicing factor (592 aa)
     
        0.416
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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