STRINGSTRING
EDP05842 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05842" - DEAD/DEAH box helicase-related protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05842DEAD/DEAH box helicase-related protein (496 aa)    
Predicted Functional Partners:
EDO98904
Ribosome biogenesis pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (678 aa)
     
 
  0.987
EDO96263
Predicted protein (494 aa)
     
        0.971
EDP03946
Predicted protein (96 aa)
   
  0.957
EDP09704
Predicted protein (468 aa)
   
 
  0.954
EDO98622
Predicted protein (107 aa)
   
 
  0.954
EDO99928
Predicted protein (555 aa)
   
 
  0.953
EDP00683
Predicted protein (516 aa)
   
 
0.941
EDP05150
Predicted protein (254 aa)
     
 
  0.938
EDO96736
Predicted protein (485 aa)
   
 
0.938
EDP05821
Predicted protein (924 aa)
     
      0.935
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (3%) [HD]