STRINGSTRING
SUB1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SUB1" - Secreted protease and protease inhibitor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB1Secreted protease and protease inhibitor (951 aa)    
Predicted Functional Partners:
ANK11
Predicted protein (152 aa)
     
  0.778
DEG2
DegP-type protease (626 aa)
   
   
  0.773
PKL1
Protein phosphatase 1 beta (863 aa)
   
   
  0.728
FAP50
Flagellar associated protein; Key component of the nexin-dynein regulatory complex (N- DRC), essential for N-DRC integrity. Involved in the regulation of flagellar motility (1159 aa)
   
  0.696
EDP07556
Predicted protein (315 aa)
   
   
  0.692
DMC1
Rad51-like protein (343 aa)
   
   
  0.690
EDP09460
Predicted protein (217 aa)
     
        0.681
EDP00429
Predicted protein (75 aa)
     
        0.680
EDO97559
Predicted protein (348 aa)
     
        0.680
EDO99895
Predicted protein (535 aa)
     
        0.676
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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