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SPLH1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SPLH1" - DEAH-box nuclear pre-mRNA splicing factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPLH1DEAH-box nuclear pre-mRNA splicing factor (689 aa)    
Predicted Functional Partners:
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.963
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.962
EDP03322
Predicted protein (811 aa)
     
  0.959
EDP05779
Predicted protein (150 aa)
       
  0.918
EDP09592
Predicted protein (698 aa)
     
  0.877
EDP00856
Predicted protein (456 aa)
     
  0.877
EDP05842
DEAD/DEAH box helicase-related protein (496 aa)
     
  0.872
PRP8
Splicing factor, component of the U5 snRNP and of the spliceosome (2346 aa)
     
  0.867
POLQ1
DNA polymerase theta (2508 aa)
   
  0.865
UAP56
Subunit of exon junction complex (435 aa)
     
  0.856
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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