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NSG13 protein (Chlamydomonas reinhardtii) - STRING interaction network
"NSG13" - Nitrogen-starved gametogenesis 13 in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSG13Nitrogen-starved gametogenesis 13 (587 aa)    
Predicted Functional Partners:
EDP02243
Predicted protein (911 aa)
     
        0.654
FAD5B
Fatty acid desaturase-like protein (195 aa)
     
   
  0.491
FAT1
Acyl carrier protein thioesterase (395 aa)
     
   
  0.488
EDP04402
Predicted protein (517 aa)
     
        0.488
EDP08844
Hypothetical protein (195 aa)
     
        0.483
EDP00882
Predicted protein (191 aa)
     
        0.480
ECH1
enoylCoA hydratase/isomerase (282 aa)
           
  0.479
PSBS2
Chloroplast photosystem II-associated 22 kDa protein (245 aa)
           
  0.476
PSBS1
Chloroplast photosystem II-associated 22 kDa protein (245 aa)
           
  0.476
MAP2
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (510 aa)
           
  0.476
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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