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EDP05988 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP05988" - GTPase Der in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05988GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (450 aa)    
Predicted Functional Partners:
GIDA1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme (625 aa)
   
 
  0.810
GIDB1
Methyltransferase (258 aa)
   
   
  0.793
EDP03710
Predicted protein (365 aa)
   
 
  0.705
EDP08818
Predicted protein (388 aa)
   
 
  0.553
PDI5
Protein disulfide isomerase (474 aa)
   
 
  0.553
EDO96229
Predicted protein (656 aa)
   
 
  0.553
EDO97317
Predicted protein (623 aa)
   
   
  0.435
EDP03979
Predicted protein (1326 aa)
     
   
  0.422
PCN1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
         
  0.419
EDP01438
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (589 aa)
   
   
  0.415
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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