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RNP3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RNP3" - Small nucleolar ribonucleoprotein U3 component in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNP3Small nucleolar ribonucleoprotein U3 component (182 aa)    
Predicted Functional Partners:
EDP07846
Predicted protein (286 aa)
     
  0.999
RPS2
Ribosomal protein S2 (274 aa)
   
  0.999
PRPS5
Plastid ribosomal protein S5 (673 aa)
   
  0.999
RPS3
Ribosomal protein S3 (230 aa)
   
  0.999
RPS11
Ribosomal protein S11 (156 aa)
   
  0.999
PRPS10
Plastid ribosomal protein S10 (169 aa)
   
  0.999
RPS20
Ribosomal protein S20 (121 aa)
   
  0.999
RPS15a
Ribosomal protein S15a (130 aa)
   
  0.999
rps8
Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (153 aa)
   
  0.999
RPS14
Ribosomal protein S14 (153 aa)
   
  0.999
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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