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EDP06006 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06006" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06006Predicted protein (665 aa)    
Predicted Functional Partners:
EDO98322
cysteinyl-tRNA synthetase (637 aa)
   
   
 
0.828
GUA1
GMP synthetase (535 aa)
   
   
  0.778
EDO97326
Predicted protein (246 aa)
   
 
  0.763
EDO97327
Predicted protein (403 aa)
   
 
  0.756
EDP06926
Predicted protein (796 aa)
   
   
  0.756
EDP09046
Predicted protein (57 aa)
   
 
  0.729
EDO99104
Predicted protein (369 aa)
   
   
  0.694
EDO99518
Predicted protein (1177 aa)
     
   
  0.692
Sat1
Serine acetyltransferase (392 aa)
       
  0.684
SAT2
Serine O-acetyl transferase (480 aa)
       
  0.684
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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