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EDP06008 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06008" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06008Predicted protein (308 aa)    
Predicted Functional Partners:
EDP06926
Predicted protein (796 aa)
   
 
  0.614
EIF5Ba
Eukaryotic initiation factor (1651 aa)
     
 
  0.593
LCI8
N-acetylglutamate synthase (611 aa)
         
  0.470
HIS5
Histidinol phosphate aminotransferase (373 aa)
       
 
  0.461
HYDEF
Iron hydrogenase assembly protein (1151 aa)
   
   
  0.457
DPS1
Dihydrodipicolinate synthase (345 aa)
       
 
  0.453
EDP05732
Protein phosphatase 5-like protein (507 aa)
     
      0.426
EDP06649
Predicted protein (353 aa)
     
   
  0.417
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
   
  0.416
EDP09941
Predicted protein (161 aa)
     
 
  0.411
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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