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EDP06016 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06016" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06016Predicted protein (627 aa)    
Predicted Functional Partners:
EDP05726
Predicted protein (625 aa)
 
0.936
EDP04538
Predicted protein (1975 aa)
   
  0.757
EDP03608
Predicted protein (630 aa)
 
0.693
EDP07756
Predicted protein (650 aa)
 
0.683
EDO96210
Predicted protein (580 aa)
 
0.680
EDO98284
Predicted protein (195 aa)
 
0.673
EDO99773
ABC transporter (1379 aa)
   
0.666
EDP00368
Predicted protein (458 aa)
   
0.665
EDP01451
Predicted protein (220 aa)
   
0.663
EDP00679
Predicted protein (252 aa)
 
0.659
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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