STRINGSTRING
EDP06019 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06019" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06019Predicted protein (342 aa)    
Predicted Functional Partners:
EDO99097
Predicted protein (530 aa)
     
  0.794
EDP01241
Predicted protein (367 aa)
     
 
0.782
EDP08048
Predicted protein (385 aa)
     
0.781
EDP08962
Predicted protein (369 aa)
     
0.770
TOG1
Microtubule associated protein (1942 aa)
     
  0.749
EDP04084
Predicted protein (1377 aa)
     
  0.743
DHC9
Dynein heavy chain 9 (2612 aa)
     
  0.741
EDP07530
Predicted protein (565 aa)
     
  0.728
MAD2
Mitotic spindle assembly checkpoint protein (206 aa)
     
  0.695
CDC20
Activator and specificity subunit of anaphase promoting complex (477 aa)
     
  0.678
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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