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EDP06029 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06029" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06029Predicted protein (331 aa)    
Predicted Functional Partners:
EDP02436
Predicted protein (570 aa)
     
        0.510
EDO98576
Predicted protein (352 aa)
     
        0.505
EDP02223
Fe-S oxidoreductase (1017 aa)
     
        0.475
EDO97666
Predicted protein (303 aa)
     
        0.475
PUS2
tRNA pseudouridine synthase (239 aa)
     
        0.465
EDO98458
Histone methyltransferase (711 aa)
     
        0.452
EDP04943
Ribosomal RNA adenine methylase transferase (203 aa)
     
        0.424
EDO97791
Predicted protein (749 aa)
     
        0.422
EDP02489
Predicted protein (266 aa)
     
        0.420
EDP09724
Predicted protein (830 aa)
     
        0.414
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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