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EDP06045 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06045" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06045Predicted protein (199 aa)    
Predicted Functional Partners:
EDP07834
Predicted protein (1059 aa)
     
        0.666
EDP05784
Predicted protein (610 aa)
     
        0.661
EDP09704
Predicted protein (468 aa)
     
        0.653
CPLD16
RNA methyl transferase-related protein (423 aa)
     
        0.652
EDP03163
Predicted protein (514 aa)
     
        0.648
EDP00683
Predicted protein (516 aa)
     
        0.647
EDP09234
Predicted protein (613 aa)
     
        0.627
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
        0.616
TRM2C
tRNA (uracil-5-)-methyltransferase (364 aa)
     
        0.615
EDP08920
Predicted protein (523 aa)
     
        0.607
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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