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EDP06071 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06071" - PtdGroP synthase-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06071PtdGroP synthase-like protein (109 aa)    
Predicted Functional Partners:
PCT2
Phosphatidate cytidylyltransferase (288 aa)
   
 
  0.708
EDP05463
Predicted protein (223 aa)
     
 
  0.700
PCT1
CDP-DAG synthetase (458 aa)
   
 
  0.690
RNB2
3’-5’ exoribonuclease II (699 aa)
       
 
  0.682
RNB1
3’-5’ exoribonuclease (1061 aa)
       
 
  0.682
EDP09536
Predicted protein (619 aa)
       
  0.566
EDP09534
Predicted protein (702 aa)
       
  0.566
SECA1
Chloroplast-associated SecA protein (1029 aa)
         
  0.531
SECA2
Chloroplast-associated SecA protein (342 aa)
         
  0.531
EDO99233
Predicted protein (330 aa)
         
  0.531
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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