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EDP06084 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06084" - WD40 repeat protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06084WD40 repeat protein (382 aa)    
Predicted Functional Partners:
EDP04828
Predicted protein (526 aa)
     
  0.960
EDP03955
Predicted protein (451 aa)
     
  0.956
EDO96621
THO complex 3 G protein beta subunit (347 aa)
     
  0.956
EDO98755
Predicted protein (1302 aa)
     
  0.908
EDO96769
Predicted protein (213 aa)
     
  0.907
ABH1
mRNA cap-binding protein (1134 aa)
     
  0.857
REF1
RNA export factor (137 aa)
     
  0.784
UAP56
Subunit of exon junction complex (435 aa)
     
  0.781
EDP03298
mRNA cleavage and polyadenylation factor complex II subunit (423 aa)
     
 
    0.755
EDP05271
RNA processing protein (511 aa)
     
 
    0.733
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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