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EDP06105 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06105" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06105Predicted protein (457 aa)    
Predicted Functional Partners:
EIF5Ba
Eukaryotic initiation factor (1651 aa)
              0.516
EDP06654
Predicted protein (460 aa)
   
        0.507
EDP01686
Predicted protein (969 aa)
     
   
  0.503
EDP03227
Predicted protein (5080 aa)
     
        0.501
EDP00038
Predicted protein (860 aa)
     
        0.494
EDP09579
Predicted protein (1121 aa)
     
   
  0.482
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
         
  0.476
EDP02019
Predicted protein (1084 aa)
     
        0.475
EDO95654
Predicted protein (139 aa)
     
        0.475
UBC8
Ubiquitin-protein ligase (1258 aa)
     
   
  0.459
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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