STRINGSTRING
EDP06110 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06110" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06110Predicted protein (432 aa)    
Predicted Functional Partners:
EDO96991
Predicted protein (308 aa)
     
        0.665
EDP04402
Predicted protein (517 aa)
     
        0.648
EDO98247
Predicted protein (80 aa)
     
        0.526
EDP09879
Predicted protein (864 aa)
     
        0.508
EDP01551
Predicted protein (783 aa)
     
        0.507
EDO96627
Predicted protein (292 aa)
     
        0.506
VSR1
Vacuolar sorting receptor (700 aa)
     
        0.504
AMT1D
Ammonium transporter (499 aa)
     
        0.476
EDP09078
Predicted protein (440 aa)
     
        0.475
NSG13
Nitrogen-starved gametogenesis 13 (587 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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