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EDP06112 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06112" - Hypothetical protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06112Hypothetical protein (392 aa)    
Predicted Functional Partners:
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
     
        0.551
PHOB
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1010 aa)
     
        0.535
ISA3
Isoamylase, starch debranching enzyme (725 aa)
     
        0.518
IDH1
Isocitrate dehydrogenase, NAD-dependent (384 aa)
     
        0.517
EDP00988
AIR synthase-related protein (1403 aa)
     
        0.509
DPE1
4-alpha-glucanotransferase (941 aa)
     
        0.500
EDO96864
Predicted protein (297 aa)
           
  0.456
PDK2
Pyruvate dehydrogenase kinase (324 aa)
     
        0.430
AMYA2
Alpha-amylase (413 aa)
     
        0.423
EDO99189
Predicted protein (278 aa)
     
        0.416
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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