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CDO1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CDO1" - Cysteine dioxygenase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO1Cysteine dioxygenase (269 aa)    
Predicted Functional Partners:
AST4
Aspartate aminotransferase (399 aa)
         
  0.927
AST3
Aspartate aminotransferase (428 aa)
         
  0.927
AST1
Aspartate aminotransferase (433 aa)
         
  0.927
OASTL3
Cysteine synthase (387 aa)
         
  0.925
OASTL1
Cysteine synthase (414 aa)
         
  0.925
OASTL2
Cysteine synthase (382 aa)
         
  0.923
METC
Cystathionine beta-lyase (517 aa)
         
  0.902
OASTL4
Cysteine synthase (359 aa)
         
  0.901
EDP09484
Predicted protein (208 aa)
         
    0.800
GSH1
Gamma-glutamylcysteine synthetase (479 aa)
         
    0.800
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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