STRINGSTRING
EDP06160 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06160" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06160Predicted protein (312 aa)    
Predicted Functional Partners:
EDP05767
Predicted protein (912 aa)
     
        0.511
GTR6
Glycosyl transferase; group 1 (542 aa)
     
        0.450
EDP08161
Predicted protein (430 aa)
     
        0.427
EDP01598
Predicted protein (1225 aa)
     
        0.426
PDE5
Cyclic nucleotide phosphodiesterase (272 aa)
     
        0.425
EDO98017
Predicted protein (540 aa)
     
        0.416
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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