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EDP06172 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06172" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06172Predicted protein (325 aa)    
Predicted Functional Partners:
EDO98006
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1085 aa)
     
      0.955
EDP03818
Predicted protein (95 aa)
       
      0.953
EDP00098
Predicted protein (129 aa)
       
      0.953
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
      0.950
COPA1
alpha-COP; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1256 aa)
       
      0.626
CNK3
NimA-related protein kinase 3 (912 aa)
     
        0.543
EDP07947
Predicted protein (356 aa)
     
        0.513
EDO96539
Ankyrin-repeat protein (749 aa)
     
        0.506
EDP02246
Predicted protein (1150 aa)
     
        0.502
EDP05786
Predicted protein (751 aa)
     
        0.482
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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