STRINGSTRING
EDP06185 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06185" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06185Predicted protein (185 aa)    
Predicted Functional Partners:
SUI1B
Translation initiation factor SUI1 family protein (110 aa)
     
 
  0.976
SUI1A
Translation initiation protein (119 aa)
     
 
  0.764
SMP6A
U6 small ribonucleoprotein F; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (89 aa)
   
        0.637
EDP05108
Predicted protein (408 aa)
     
        0.613
SPL3
SF3A3 splicing factor 3a, subunit 3 (508 aa)
     
        0.553
PFD2
Molecular chaperone prefoldin, subunit 2 (112 aa)
     
        0.547
SMP11
Sm protein (100 aa)
     
        0.523
CBP20
Nuclear cap-binding protein (143 aa)
     
        0.502
EDP01981
Predicted protein (110 aa)
     
        0.490
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
        0.476
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (6%) [HD]