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UBC3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"UBC3" - E2 ubiquitin-conjugating enzyme in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBC3E2 ubiquitin-conjugating enzyme ; Belongs to the ubiquitin-conjugating enzyme family (163 aa)    
Predicted Functional Partners:
EDP05050
Predicted protein (624 aa)
   
 
  0.903
EDP00184
Predicted protein (400 aa)
     
 
  0.897
EDP01120
Small ubiquitin-like modifier 1; Ubiquitin-like protein (94 aa)
     
  0.894
STM2
Ubiquitin-like protein (148 aa)
     
  0.890
EDP01119
Predicted protein; Small ubiquitin-like modifier 2 (97 aa)
     
  0.889
EDO98075
Small ubiquitin-related modifier (79 aa)
     
  0.888
EDO98074
Predicted protein (77 aa)
     
  0.884
UBA1
Ubiquitin-activating enzyme E1 ; Belongs to the ubiquitin-activating E1 family (1061 aa)
   
 
  0.875
EDP02477
RAN binding protein, RANBP1 (133 aa)
     
 
  0.872
PCN1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
 
  0.866
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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