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LPA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LPA1" - Membrane GTP-binding protein LepA in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPA1Membrane GTP-binding protein LepA (579 aa)    
Predicted Functional Partners:
EDP06649
Predicted protein (353 aa)
   
   
  0.898
EIF5Ba
Eukaryotic initiation factor (1651 aa)
   
   
  0.766
SECA1
Chloroplast-associated SecA protein (1029 aa)
     
   
  0.737
EDO99875
Tryptophanyl-trna synthetase (421 aa)
   
   
  0.664
EDP02085
Predicted protein (499 aa)
   
   
  0.647
PRPS5
Plastid ribosomal protein S5 (673 aa)
     
 
  0.640
ASPS1
aspartyl-tRNA synthetase (714 aa)
   
   
  0.618
EFT1a
Plastid-specific ribosomal protein 7; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1013 aa)
   
   
  0.611
INFB
Organellar translation initiation factor (373 aa)
   
   
  0.607
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
   
  0.601
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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