STRINGSTRING
PANE protein (Chlamydomonas reinhardtii) - STRING interaction network
"PANE" - Ketopantoate reductase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PANEKetopantoate reductase (290 aa)    
Predicted Functional Partners:
EDP00792
Cell wall protein (577 aa)
           
  0.712
PANB
Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (441 aa)
       
  0.684
PANC
Pantothenate synthetase (199 aa)
   
 
  0.618
NDA2
type-II calcium-dependent NADH dehydrogenase (615 aa)
         
  0.537
METE
Cobalamin-independent methionine synthase (815 aa)
           
  0.494
EDO98082
Flagellar protein (1539 aa)
           
  0.463
EDO97791
Predicted protein (749 aa)
     
   
  0.416
PGH1
Enolase (477 aa)
           
  0.416
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
           
  0.404
EDO98690
Predicted protein (440 aa)
   
        0.401
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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