STRINGSTRING
EDP06233 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06233" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06233Predicted protein (574 aa)    
Predicted Functional Partners:
EDP06644
Predicted protein (760 aa)
     
        0.528
EDP08218
Predicted protein (871 aa)
     
        0.510
EDP01084
Predicted protein (866 aa)
     
        0.504
EDP02731
Predicted protein (467 aa)
     
        0.501
EDP00397
Predicted protein (720 aa)
     
        0.477
EDO97985
Predicted protein (236 aa)
     
        0.477
EDP05664
Lipoxygenase (2315 aa)
     
        0.476
NPH4
Nephrocystin-4-like protein (1772 aa)
     
        0.476
EDO96866
Predicted protein (1152 aa)
     
        0.476
EDO96235
Predicted protein (992 aa)
     
        0.476
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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