STRINGSTRING
EDP06242 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06242" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06242Predicted protein (296 aa)    
Predicted Functional Partners:
EDP05789
Predicted protein (313 aa)
     
        0.507
SPO11A
Topoisomerase; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (414 aa)
     
        0.505
SMC6A
Structural maintenance of chromosomes protein 6A (1207 aa)
     
        0.505
SMC5B
Structural maintenance of chromosomes protein 5B (1124 aa)
     
        0.480
FAP191
Flagellar associated protein, quinone reductase-like protein (279 aa)
     
        0.478
EDO96376
Predicted protein (180 aa)
     
        0.477
POLA4
Primase subunit of DNA polymerase alpha (458 aa)
     
        0.475
TUG
Gamma tubulin; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (468 aa)
     
        0.475
CPLD23
Sugar nucleotide transporter-like protein (269 aa)
     
        0.475
EDO96765
Predicted protein (242 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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