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SMP10 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SMP10" - Prediceted snRNP core protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMP10Prediceted snRNP core protein (225 aa)    
Predicted Functional Partners:
EDP00345
Predicted protein (107 aa)
     
        0.505
EDO98598
Predicted protein (176 aa)
     
        0.503
EDP03109
Predicted protein (167 aa)
     
        0.480
EDO98485
Predicted protein (124 aa)
     
        0.477
EDP06891
Predicted protein (1037 aa)
     
        0.475
EDP08330
Adaptin-interacting protein (402 aa)
     
        0.431
EDP06921
Predicted protein (450 aa)
     
        0.427
EDP09929
Predicted protein (737 aa)
     
        0.412
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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