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DDB1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DDB1" - UV-damaged DNA binding complex subunit 1 protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB1UV-damaged DNA binding complex subunit 1 protein (1147 aa)    
Predicted Functional Partners:
CUL2
Cullin (782 aa)
     
  0.992
EDP09803
Transducin-like protein (494 aa)
       
  0.979
EDP09376
Predicted protein (1850 aa)
     
  0.979
RBX1
Ring-box protein (130 aa)
       
  0.969
EDP00409
Predicted protein (862 aa)
     
 
  0.952
CUL1
Ubiquitin ligase SCF complex subunit cullin (725 aa)
     
  0.950
CUL3
Cullin (744 aa)
     
  0.942
EDP06632
Predicted protein (911 aa)
     
      0.886
EDP07588
Predicted protein (287 aa)
     
      0.856
MUT9
Serine/threonine protein kinase, transcription repression (699 aa)
     
      0.847
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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