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KAT1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"KAT1" - Katanin catalytic subunit, 60 kDa in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAT1Katanin catalytic subunit, 60 kDa; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (558 aa)    
Predicted Functional Partners:
PF15
Katanin p80 subunit; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (798 aa)
     
 
  0.927
EDP06482
Predicted protein (117 aa)
         
  0.546
TF2F
Transcription factor IIF (206 aa)
     
        0.513
IAR1
Kinesin family protein (994 aa)
     
 
  0.503
EDP08585
Predicted protein (62 aa)
   
   
  0.490
EDP06019
Predicted protein (342 aa)
     
 
  0.489
TOG1
Microtubule associated protein (1942 aa)
     
   
  0.480
EDP05043
Predicted protein (311 aa)
     
        0.478
EDO98269
Predicted protein (267 aa)
     
 
  0.477
AP1M1
Mu1-Adaptin (425 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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