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EDP06341 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06341" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06341Predicted protein (180 aa)    
Predicted Functional Partners:
GPM1a
Phosphoglucomutase (600 aa)
            0.722
EDP01505
Predicted protein (299 aa)
       
 
  0.542
EDP00337
Predicted protein (178 aa)
     
        0.477
HYDEF
Iron hydrogenase assembly protein (1151 aa)
     
   
  0.433
ASF1
Anti-silencing factor (225 aa)
     
        0.421
EDP00507
tRNA-nucleotidyltransferase, mitochondrial (200 aa)
         
  0.412
EDP00325
Predicted protein (163 aa)
   
 
  0.407
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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