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EDP06344 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06344" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06344Predicted protein (990 aa)    
Predicted Functional Partners:
EDP04373
Predicted protein (2993 aa)
     
        0.590
PRP4
Splicing factor, component of the U4/U6-U5 snRNP complex (350 aa)
     
        0.582
EDO97239
Predicted protein (859 aa)
     
     
0.570
EDP04221
Predicted protein (1178 aa)
     
        0.525
EDO99262
Predicted protein (891 aa)
     
        0.525
EDO99883
Hypothetical protein (1020 aa)
     
        0.524
EDP09762
Predicted protein (653 aa)
     
        0.522
EDO96850
Predicted protein (786 aa)
     
        0.522
EDO97832
Predicted protein (620 aa)
     
        0.521
EDP09509
Predicted protein (494 aa)
     
        0.511
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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