STRINGSTRING
EDP06358 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06358" - DNA binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06358DNA binding protein (1076 aa)    
Predicted Functional Partners:
EDP08782
Histone transcription regulator HIRA (1042 aa)
     
        0.608
EDO97574
Predicted protein (761 aa)
     
        0.565
EDO96882
Predicted protein (1826 aa)
     
        0.545
EDO98953
DNA binding protein (661 aa)
     
        0.534
EDO99912
Predicted protein (190 aa)
     
        0.524
COG2
Component of oligomeric golgi complex 2 (567 aa)
     
        0.514
EDP04749
Hypothetical protein (1333 aa)
     
        0.513
SCC3
Cohesin complex subunit (1259 aa)
     
        0.513
RPA70A
Replication protein A, 70 kDa DNA-binding subunit (451 aa)
     
        0.513
MLH1
Mismatch repair protein (1007 aa)
     
        0.508
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (8%) [HD]