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EDP06412 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06412" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06412Predicted protein (966 aa)    
Predicted Functional Partners:
EDP03171
Predicted protein (1237 aa)
     
        0.563
EDP01994
Predicted protein (1159 aa)
     
        0.522
EDO96801
Predicted protein (2261 aa)
     
        0.520
ATM3
Half-size ABC transporter, membrane protein (580 aa)
     
        0.515
EDP09490
Predicted protein (755 aa)
     
        0.513
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.513
EDP03089
Predicted protein (639 aa)
     
        0.512
EDP03713
Predicted protein (475 aa)
     
        0.510
EDP01323
Predicted protein (1479 aa)
     
        0.507
EDO95971
Predicted protein (129 aa)
     
        0.507
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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