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EDP06412 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06412" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06412Predicted protein (966 aa)    
Predicted Functional Partners:
EDP03171
Predicted protein (1237 aa)
     
        0.442
EDP01994
Predicted protein (1159 aa)
     
        0.408
EDO96801
Predicted protein (2261 aa)
     
        0.407
EDP09490
Predicted protein (755 aa)
     
        0.406
ATM3
Half-size ABC transporter, membrane protein (580 aa)
     
        0.406
EDP03089
Predicted protein (639 aa)
     
        0.406
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.406
EDP03713
Predicted protein (475 aa)
     
        0.405
EDP01323
Predicted protein (1479 aa)
     
        0.405
EDO95971
Predicted protein (129 aa)
     
        0.405
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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