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EDP06437 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06437" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06437Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (367 aa)    
Predicted Functional Partners:
EDP00663
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (179 aa)
   
 
  0.947
EDP03165
Predicted protein (330 aa)
     
 
  0.940
LCI30
Low-CO2-inducible protein (260 aa)
     
 
  0.936
NOP58
Nucleolar protein, component of C/D snoRNPs (508 aa)
     
 
  0.936
EDP04787
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (396 aa)
     
 
  0.931
EDP03968
Predicted protein (319 aa)
     
 
  0.925
EDP06418
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (634 aa)
     
 
  0.922
EDO96830
Predicted protein (160 aa)
     
 
  0.920
EDP03582
Predicted protein (380 aa)
     
 
  0.915
EDP01097
Predicted protein (181 aa)
     
 
  0.915
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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