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EDP06444 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06444" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06444Predicted protein (313 aa)    
Predicted Functional Partners:
HNR1
Heterogeneous nuclear ribonucleoprotein (295 aa)
       
      0.927
SPL7
Splicing factor (647 aa)
       
      0.624
EDP03151
Trehalase-like protein (594 aa)
     
 
  0.607
EDP02683
Predicted protein (466 aa)
     
   
  0.471
XRN1
Single-stranded RNA 5’->3’ exonuclease (171 aa)
       
 
  0.467
RNP10
RNA binding protein (229 aa)
       
      0.459
EDP08177
Protein kinase C binding protein (132 aa)
           
  0.455
NFR1
NADPH-dependent flavin reductase; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of the anamorsin/DRE2 homolog (620 aa)
           
  0.455
EDO97773
Predicted protein (128 aa)
           
  0.455
EDP05037
Predicted protein (410 aa)
       
 
  0.447
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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