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EDP06453 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06453" - Arylsulfatase-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06453Arylsulfatase-like protein (635 aa)    
Predicted Functional Partners:
MMP13
Matrix metalloproteinase-like protein (756 aa)
     
        0.693
EDP05368
Predicted protein (505 aa)
     
        0.675
ALK3
Aurora-like kinase (718 aa)
     
        0.669
VSP3
Extracellular matrix protein (474 aa)
     
        0.664
EDP00118
Predicted protein (376 aa)
     
        0.662
GOX18
Glyoxal or galactose oxidase (733 aa)
     
        0.662
EDP05056
Predicted protein (111 aa)
     
        0.661
EDO96489
Predicted protein (118 aa)
     
        0.661
FUT11
Alpha 1,3 fucosyltransferase (407 aa)
     
        0.660
EDP04747
Predicted protein (847 aa)
     
    0.654
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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