STRINGSTRING
EDP06469 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06469" - DNA binding protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06469DNA binding protein (729 aa)    
Predicted Functional Partners:
EDP07858
Predicted protein (1182 aa)
     
        0.521
EDO98861
Predicted protein (658 aa)
     
        0.519
EDP04662
Predicted protein (596 aa)
     
        0.505
EDP09896
Predicted protein (299 aa)
     
        0.500
ATP1A
Mitochondrial F1F0 ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane (569 aa)
     
        0.499
EDP03106
Gelsolin (736 aa)
     
        0.485
EDO96636
Predicted protein (626 aa)
     
        0.483
EDP09239
Hypothetical protein (667 aa)
     
        0.480
MPPA2
Mitochondrial processing peptidase alpha subunit (485 aa)
     
        0.476
EDP02367
Predicted protein (108 aa)
     
        0.476
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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