STRINGSTRING
CGL72 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CGL72" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGL72Predicted protein (271 aa)    
Predicted Functional Partners:
EDP05064
Riboflavin kinase (421 aa)
         
  0.652
EDP00988
AIR synthase-related protein (1403 aa)
              0.515
PUS2
tRNA pseudouridine synthase (239 aa)
   
        0.511
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
         
  0.470
EDP04268
Predicted protein (750 aa)
     
   
  0.446
EDO99060
Predicted protein (334 aa)
   
   
  0.438
EDO97026
Aminotransferase-like protein (355 aa)
   
        0.435
EDP00143
Predicted protein (446 aa)
   
        0.432
TRM2C
tRNA (uracil-5-)-methyltransferase (364 aa)
   
        0.424
PUS1
tRNA pseudouridine synthase (382 aa)
   
        0.421
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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