STRINGSTRING
EDP06485 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06485" - RNA binding rRNA processing protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06485RNA binding rRNA processing protein (1280 aa)    
Predicted Functional Partners:
EDP04089
Predicted protein (1108 aa)
     
  0.998
NOP58
Nucleolar protein, component of C/D snoRNPs (508 aa)
     
  0.998
NOP14
Nucleolar protein (1137 aa)
     
  0.997
EDP06418
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (634 aa)
     
  0.997
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
  0.996
EDP07890
Predicted protein (319 aa)
     
 
  0.996
EDP02318
Predicted protein (1017 aa)
     
 
  0.996
PUF1
Puf protein (717 aa)
     
 
  0.996
EDP05862
Predicted protein (1429 aa)
     
  0.996
EDP07902
Predicted protein (1905 aa)
     
  0.995
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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