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GIDA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"GIDA1" - tRNA uridine 5-carboxymethylaminomethyl modification enzyme in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIDA1tRNA uridine 5-carboxymethylaminomethyl modification enzyme (625 aa)    
Predicted Functional Partners:
EDO99160
Predicted protein (465 aa)
 
  0.961
GIDB1
Methyltransferase (258 aa)
   
   
  0.873
EDP06261
Predicted protein (443 aa)
     
 
  0.819
EDP02487
Predicted protein (387 aa)
     
 
  0.782
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
   
  0.778
EDP03710
Predicted protein (365 aa)
 
 
  0.744
VPS45
SM/Sec1-family protein (620 aa)
 
 
        0.706
EDP06789
Predicted protein (131 aa)
     
 
  0.644
EDP06649
Predicted protein (353 aa)
   
 
  0.590
ATP1B
Mitochondrial F1F0 ATP synthase, alpha subunit (736 aa)
   
   
  0.590
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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