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EDP06518 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06518" - PfkB-type carbohydrate kinase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06518PfkB-type carbohydrate kinase (333 aa)    
Predicted Functional Partners:
RPI2
Ribose-5 phosphate isomerase-related protein (291 aa)
   
 
  0.935
RPI1
Ribose-5-phosphate isomerase (269 aa)
       
  0.933
TRK1
Transketolase (718 aa)
   
 
  0.921
GPM1a
Phosphoglucomutase (600 aa)
       
  0.916
RPPK1
Ribose-phosphate pyrophosphokinase (424 aa)
     
  0.916
GPM2
Phosphoglucomutase (583 aa)
   
 
  0.914
EDP03718
Predicted protein (234 aa)
         
  0.827
EDP02503
Predicted protein (142 aa)
       
    0.801
EDP08197
Predicted protein (300 aa)
 
   
  0.640
EDP05064
Riboflavin kinase (421 aa)
   
 
  0.594
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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