STRINGSTRING
EDP06520 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06520" - Metalloprotease in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06520Metalloprotease (433 aa)    
Predicted Functional Partners:
EDP09324
Predicted protein (1281 aa)
       
  0.986
HSP90B
Heat shock protein 90B (768 aa)
       
    0.741
HSP90A
Heat shock protein 90A (705 aa)
       
    0.740
HSP90C
Heat shock protein 90C (810 aa)
       
    0.740
EIF3D
Eukaryotic initiation factor (325 aa)
       
      0.613
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.600
EDP01214
Fimbrin-like protein (365 aa)
       
  0.586
MYO3
Myosin heavy chain (639 aa)
       
  0.585
EDP04260
Predicted protein (93 aa)
       
  0.585
EDP03325
Predicted protein (728 aa)
       
  0.585
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (7%) [HD]