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EDP06523 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06523" - Predicted protein in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06523Predicted protein; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (119 aa)    
Predicted Functional Partners:
EDP05450
Global transcription factor (325 aa)
     
  0.988
EDP05072
Predicted protein (312 aa)
     
  0.988
RPB11
DNA-directed RNA polymerase II, 13.6 kDa polypeptide (115 aa)
     
    0.974
RPB7A
DNA-directed RNA polymerase II, 19 kDa polypeptide (176 aa)
     
    0.974
RPB3
DNA-directed RNA polymerase II, 36 kDa polypeptide (275 aa)
     
  0.974
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
     
    0.972
EDP01939
Predicted protein (435 aa)
       
    0.972
RPB9
DNA-directed RNA polymerase II, 14.5 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (118 aa)
     
  0.971
EDP05525
Predicted protein (224 aa)
     
  0.971
RPB5
DNA-directed RNA polymerase II, 23 kDa polypeptide (206 aa)
     
    0.970
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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