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EDP06538 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06538" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06538Predicted protein (128 aa)    
Predicted Functional Partners:
SQD2
Sulfolipid synthase (402 aa)
     
  0.760
GTR7
Glycosyl transferase (143 aa)
     
  0.760
SQD3
Sulfolipid synthase (395 aa)
     
  0.760
GTR6
Glycosyl transferase; group 1 (542 aa)
     
  0.760
GTR18
Glycosyl transferase (443 aa)
     
  0.760
GTR5
Glycosyl transferase, group 1 (435 aa)
     
  0.760
EDO96914
Predicted protein (4653 aa)
     
  0.760
GTR16
Glycosyl transferase (475 aa)
     
  0.760
SBE2
Starch branching enzyme (788 aa)
     
 
  0.732
SBE3
Starch branching enzyme (747 aa)
     
 
  0.732
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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